Difference between revisions of "SJ12965"
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(Created page with "Category:gene == Gene SJ18507 == * transcription-direction: ** positive * right-end-position: ** 124013 * left-end-position: ** 112781 * centisome-position: ** 46.342514...") |
(Created page with "Category:gene == Gene SJ06657 == * transcription-direction: ** negative * right-end-position: ** 51994 * left-end-position: ** 42460 * centisome-position: ** 8.993970...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ06657 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 51994 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 42460 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 8.993970 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[6.3.4.10-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[6.3.4.11-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[6.3.4.9-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[BIOTINLIG-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-13039]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN-17127]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-8654]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-8655]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN0-1141]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN0- | + | * [[RXN0-5098]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-7192]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[PWY0-1264]] |
− | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6984]] |
− | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | * [[ | + | * [[PWY0-522]] |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
− | * [[ | + | * [[PWY0-1275]] |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | {{#set: transcription-direction=negative}} |
− | {{#set: right-end-position= | + | {{#set: right-end-position=51994}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=42460}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=8.993970 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=11}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} |
Revision as of 11:11, 15 January 2021
Contents
Gene SJ06657
- transcription-direction:
- negative
- right-end-position:
- 51994
- left-end-position:
- 42460
- centisome-position:
- 8.993970
Organism(s) associated with this gene
Reaction(s) associated
- 6.3.4.10-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- 6.3.4.11-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- 6.3.4.9-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- BIOTINLIG-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13039
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17127
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8654
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8655
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-1141
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5098
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-7192
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY0-1264
- 3 reactions found over 4 reactions in the full pathway
- PWY-6984
- 2 reactions found over 4 reactions in the full pathway
- PWY0-522
- 2 reactions found over 2 reactions in the full pathway
- PWY0-1275
- 2 reactions found over 2 reactions in the full pathway