Difference between revisions of "SJ12971"

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(Created page with "Category:gene == Gene SJ10333 == * transcription-direction: ** positive * right-end-position: ** 54175 * left-end-position: ** 49473 * centisome-position: ** 12.601985...")
(Created page with "Category:gene == Gene SJ07891 == * transcription-direction: ** negative * right-end-position: ** 34344 * left-end-position: ** 29673 * centisome-position: ** 48.846855...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10333 ==
+
== Gene SJ07891 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 54175
+
** 34344
 
* left-end-position:
 
* left-end-position:
−
** 49473
+
** 29673
 
* centisome-position:
 
* centisome-position:
−
** 12.601985    
+
** 48.846855    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GPPSYN-RXN]]
+
* [[S-ADENMETSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-2761]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ETHYL-PWY]]
−
* [[PWY-6383]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[METHIONINE-DEG1-PWY]]
−
* [[PWY-7410]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[SAM-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5912]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7102]]
+
* [[PWY-5041]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7736]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=34344}}
−
* [[PWY-5122]]
+
{{#set: left-end-position=29673}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: centisome-position=48.846855   }}
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1581]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=54175}}
 
−
{{#set: left-end-position=49473}}
 
−
{{#set: centisome-position=12.601985   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=5}}

Revision as of 09:26, 27 August 2019

Gene SJ07891

  • transcription-direction:
    • negative
  • right-end-position:
    • 34344
  • left-end-position:
    • 29673
  • centisome-position:
    • 48.846855

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ETHYL-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • METHIONINE-DEG1-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5912
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5041
    • 3 reactions found over 4 reactions in the full pathway




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