Difference between revisions of "SJ12981"

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(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...")
(Created page with "Category:gene == Gene SJ20427 == * transcription-direction: ** negative * right-end-position: ** 499923 * left-end-position: ** 490119 * centisome-position: ** 43.15518...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13526 ==
+
== Gene SJ20427 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 196015
+
** 499923
 
* left-end-position:
 
* left-end-position:
−
** 189101
+
** 490119
 
* centisome-position:
 
* centisome-position:
−
** 56.583523    
+
** 43.15518    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[APIGNAR-RXN]]
−
* [[1.2.1.2-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[CHALCONE-ISOMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[KETOGLUTREDUCT-RXN]]
+
* [[RXN-3221]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PGLYCDEHYDROG-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-16701]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-1881]]
+
* [[PWY1F-FLAVSYN]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5497]]
+
* [[PWY-6787]]
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[P164-PWY]]
+
* [[PWY-7397]]
−
** '''6''' reactions found over '''17''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6696]]
+
* [[PWY-7897]]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-2002]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6325]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-1622]]
+
* [[PWY-5059]]
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[P162-PWY]]
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=196015}}
+
{{#set: right-end-position=499923}}
−
{{#set: left-end-position=189101}}
+
{{#set: left-end-position=490119}}
−
{{#set: centisome-position=56.583523   }}
+
{{#set: centisome-position=43.15518   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=7}}
 
{{#set: nb pathway associated=7}}

Revision as of 14:45, 5 January 2021

Gene SJ20427

  • transcription-direction:
    • negative
  • right-end-position:
    • 499923
  • left-end-position:
    • 490119
  • centisome-position:
    • 43.15518

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-2002
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6325
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway




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