Difference between revisions of "SJ12991"

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(Created page with "Category:gene == Gene SJ17386 == * transcription-direction: ** positive * right-end-position: ** 79226 * left-end-position: ** 69558 * centisome-position: ** 20.363724...")
(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...")
 
(3 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17386 ==
+
== Gene SJ12991 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 79226
+
** 568486
 
* left-end-position:
 
* left-end-position:
−
** 69558
+
** 559079
 
* centisome-position:
 
* centisome-position:
−
** 20.363724    
+
** 75.4738    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[FORMATETHFLIG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[EXOPOLYPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[INORGPYROPHOSPHAT-RXN]]
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7805]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-2161]]
−
* [[PWY-7807]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-2201]]
−
{{#set: transcription-direction=positive}}
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
{{#set: right-end-position=79226}}
+
* [[PWY-1722]]
−
{{#set: left-end-position=69558}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: centisome-position=20.363724   }}
+
* [[CODH-PWY]]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-3841]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[1CMET2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5030]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7909]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6613]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=568486}}
 +
{{#set: left-end-position=559079}}
 +
{{#set: centisome-position=75.4738   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:09, 18 March 2021

Gene SJ12991

  • transcription-direction:
    • negative
  • right-end-position:
    • 568486
  • left-end-position:
    • 559079
  • centisome-position:
    • 75.4738

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2161
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6613
    • 2 reactions found over 2 reactions in the full pathway




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