Difference between revisions of "SJ12991"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ16088 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...") |
||
| (2 intermediate revisions by one other user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12991 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 568486 | ||
| + | * left-end-position: | ||
| + | ** 559079 | ||
| + | * centisome-position: | ||
| + | ** 75.4738 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[FORMATETHFLIG-RXN]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[METHENYLTHFCYCLOHYDRO-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[METHYLENETHFDEHYDROG-NADP-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| − | ** ''' | + | * [[PWY-2161]] |
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-2201]] | ||
| + | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-1722]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[CODH-PWY]] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-3841]] | ||
| + | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[1CMET2-PWY]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5497]] | ||
| + | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
| + | * [[P164-PWY]] | ||
| + | ** '''6''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[PWY-5030]] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7909]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6613]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | </div> | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=568486}} | ||
| + | {{#set: left-end-position=559079}} | ||
| + | {{#set: centisome-position=75.4738 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=11}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ12991
- transcription-direction:
- negative
- right-end-position:
- 568486
- left-end-position:
- 559079
- centisome-position:
- 75.4738
Organism(s) associated with this gene
Reaction(s) associated
- FORMATETHFLIG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- METHENYLTHFCYCLOHYDRO-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- METHYLENETHFDEHYDROG-NADP-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-2161
- 5 reactions found over 5 reactions in the full pathway
- PWY-2201
- 9 reactions found over 10 reactions in the full pathway
- PWY-1722
- 3 reactions found over 3 reactions in the full pathway
- CODH-PWY
- 4 reactions found over 10 reactions in the full pathway
- PWY-3841
- 9 reactions found over 11 reactions in the full pathway
- 1CMET2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- P164-PWY
- 6 reactions found over 15 reactions in the full pathway
- PWY-5030
- 3 reactions found over 6 reactions in the full pathway
- PWY-7909
- 3 reactions found over 4 reactions in the full pathway
- PWY-6613
- 2 reactions found over 2 reactions in the full pathway
