Difference between revisions of "SJ12994"

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(Created page with "Category:gene == Gene SJ02694 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-14971 ** Category:...")
(Created page with "Category:gene == Gene SJ02212 == * transcription-direction: ** negative * right-end-position: ** 36226 * left-end-position: ** 22449 * centisome-position: ** 16.035688...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02694 ==
+
== Gene SJ02212 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 36226
 +
* left-end-position:
 +
** 22449
 +
* centisome-position:
 +
** 16.035688   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-14971]]
+
* [[CITSYN-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15378]]
+
* [[CSm]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCDHm]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6969]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
* [[P105-PWY]]
 
* [[P105-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[TCA]]
 
* [[TCA]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[REDCITCYC]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7254]]
 
* [[PWY-7254]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-561]]
+
* [[PWY-6969]]
−
** '''6''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-7124]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6728]]
 
* [[PWY-6728]]
 
** '''11''' reactions found over '''19''' reactions in the full pathway
 
** '''11''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY0-1353]]
+
* [[GLYOXYLATE-BYPASS]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-3781]]
+
* [[PWY-6549]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7279]]
+
* [[PWY-5750]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY66-398]]
+
* [[PWY-5690]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-4302]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1329]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
</div>
 
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=36226}}
 +
{{#set: left-end-position=22449}}
 +
{{#set: centisome-position=16.035688    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=14}}

Revision as of 11:05, 15 January 2021

Gene SJ02212

  • transcription-direction:
    • negative
  • right-end-position:
    • 36226
  • left-end-position:
    • 22449
  • centisome-position:
    • 16.035688

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P105-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • REDCITCYC
    • 5 reactions found over 9 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 11 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • PWY-7124
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • GLYOXYLATE-BYPASS
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6549
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5750
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway




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