Difference between revisions of "SJ13018"

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(Created page with "Category:gene == Gene SJ17477 == * transcription-direction: ** negative * right-end-position: ** 154277 * left-end-position: ** 144079 * centisome-position: ** 55.04493...")
(Created page with "Category:gene == Gene SJ13018 == * transcription-direction: ** negative * right-end-position: ** 236996 * left-end-position: ** 235423 * centisome-position: ** 67.83449...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17477 ==
+
== Gene SJ13018 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 154277
+
** 236996
 
* left-end-position:
 
* left-end-position:
−
** 144079
+
** 235423
 
* centisome-position:
 
* centisome-position:
−
** 55.04493    
+
** 67.83449    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[ADCLY-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12195]]
+
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12196]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-6543]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[ILEUSYN-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[ILEUDEG-PWY]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5078]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5103]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5104]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5101]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5108]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=154277}}
+
{{#set: right-end-position=236996}}
−
{{#set: left-end-position=144079}}
+
{{#set: left-end-position=235423}}
−
{{#set: centisome-position=55.04493   }}
+
{{#set: centisome-position=67.83449   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:00, 18 March 2021

Gene SJ13018

  • transcription-direction:
    • negative
  • right-end-position:
    • 236996
  • left-end-position:
    • 235423
  • centisome-position:
    • 67.83449

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6543
    • 2 reactions found over 2 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5078
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5104
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5108
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13018&oldid=131651"