Difference between revisions of "SJ13034"

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(Created page with "Category:gene == Gene SJ19063 == * transcription-direction: ** positive * right-end-position: ** 162150 * left-end-position: ** 136755 * centisome-position: ** 58.97205...")
 
(Created page with "Category:gene == Gene SJ13034 == * transcription-direction: ** positive * right-end-position: ** 87930 * left-end-position: ** 82573 * centisome-position: ** 23.792482...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19063 ==
+
== Gene SJ13034 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 162150
+
** 87930
 
* left-end-position:
 
* left-end-position:
−
** 136755
+
** 82573
 
* centisome-position:
 
* centisome-position:
−
** 58.97205    
+
** 23.792482    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-13729]]
+
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN3DJ-11230]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10717]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SGPL11]]
+
* [[RXN-10841]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
+
* [[RXN-12484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14023]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7119]]
+
* [[PWY-6307]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY3DJ-11470]]
+
* [[PWY-6857]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6861]]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7178]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=162150}}
+
{{#set: right-end-position=87930}}
−
{{#set: left-end-position=136755}}
+
{{#set: left-end-position=82573}}
−
{{#set: centisome-position=58.97205   }}
+
{{#set: centisome-position=23.792482   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:05, 18 March 2021

Gene SJ13034

  • transcription-direction:
    • positive
  • right-end-position:
    • 87930
  • left-end-position:
    • 82573
  • centisome-position:
    • 23.792482

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13034&oldid=133990"