Difference between revisions of "SJ13101"

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(Created page with "Category:gene == Gene SJ03600 == * transcription-direction: ** positive * right-end-position: ** 189329 * left-end-position: ** 181379 * centisome-position: ** 17.772636...")
(Created page with "Category:gene == Gene SJ17434 == * transcription-direction: ** negative * right-end-position: ** 211808 * left-end-position: ** 207000 * centisome-position: ** 30.60722...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03600 ==
+
== Gene SJ17434 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 189329
+
** 211808
 
* left-end-position:
 
* left-end-position:
−
** 181379
+
** 207000
 
* centisome-position:
 
* centisome-position:
−
** 17.772636    
+
** 30.60722    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-1104]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5330]]
+
* [[RXN-1143]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12889]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12890]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13224]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13225]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13226]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13227]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13228]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-3422]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-2181]]
−
* [[PWY0-1335]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7498]]
−
* [[PWY-4302]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7186]]
−
* [[PWY-3781]]
+
** '''2''' reactions found over '''12''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-1121]]
−
* [[PWY0-1334]]
+
** '''9''' reactions found over '''19''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-361]]
−
* [[PWY-6692]]
+
** '''7''' reactions found over '''15''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5168]]
−
* [[PWY-5083]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7279]]
+
{{#set: right-end-position=211808}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=207000}}
−
* [[PWY0-1573]]
+
{{#set: centisome-position=30.60722   }}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7269]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1568]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1567]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=189329}}
 
−
{{#set: left-end-position=181379}}
 
−
{{#set: centisome-position=17.772636   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=6}}

Revision as of 09:26, 27 August 2019

Gene SJ17434

  • transcription-direction:
    • negative
  • right-end-position:
    • 211808
  • left-end-position:
    • 207000
  • centisome-position:
    • 30.60722

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7186
    • 2 reactions found over 12 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5168
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13101&oldid=31312"