Difference between revisions of "SJ13109"

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(Created page with "Category:gene == Gene SJ03718 == * transcription-direction: ** negative * right-end-position: ** 188706 * left-end-position: ** 176499 * centisome-position: ** 33.94897...")
(Created page with "Category:gene == Gene SJ05555 == * transcription-direction: ** positive * right-end-position: ** 220875 * left-end-position: ** 191821 * centisome-position: ** 20.57748...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03718 ==
+
== Gene SJ05555 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 188706
+
** 220875
 
* left-end-position:
 
* left-end-position:
−
** 176499
+
** 191821
 
* centisome-position:
 
* centisome-position:
−
** 33.94897    
+
** 20.57748    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.8.1.4-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.6.3.12-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRNUTRANSHYDROGEN-RXN]]
+
* [[3.6.3.9-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7716]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7719]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8629]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-1132]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRANS-RXN-2]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5083]]
+
* [[PWY-7210]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5084]]
+
* [[PWY-7198]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5046]]
+
* [[PWY-7184]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[GLYCLEAV-PWY]]
+
* [[PWY-6545]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PYRUVDEHYD-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=220875}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=191821}}
−
{{#set: right-end-position=188706}}
+
{{#set: centisome-position=20.57748   }}
−
{{#set: left-end-position=176499}}
 
−
{{#set: centisome-position=33.94897   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:07, 15 January 2021

Gene SJ05555

  • transcription-direction:
    • positive
  • right-end-position:
    • 220875
  • left-end-position:
    • 191821
  • centisome-position:
    • 20.57748

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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