Difference between revisions of "SJ13119"

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(Created page with "Category:gene == Gene SJ12778 == * transcription-direction: ** positive * right-end-position: ** 63127 * left-end-position: ** 52326 * centisome-position: ** 13.607675...")
(Created page with "Category:gene == Gene SJ14637 == * transcription-direction: ** negative * right-end-position: ** 68925 * left-end-position: ** 63378 * centisome-position: ** 20.35757...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12778 ==
+
== Gene SJ14637 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 63127
+
** 68925
 
* left-end-position:
 
* left-end-position:
** 52326
+
** 63378
 
* centisome-position:
 
* centisome-position:
** 13.607675    
+
** 20.35757    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
+
* [[1.3.1.20-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12642]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12645]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[PWY-6760]]
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-5129]]
+
{{#set: transcription-direction=negative}}
** '''4''' reactions found over '''13''' reactions in the full pathway
+
{{#set: right-end-position=68925}}
* [[PWY3DJ-12]]
+
{{#set: left-end-position=63378}}
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=20.35757   }}
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=63127}}
 
{{#set: left-end-position=52326}}
 
{{#set: centisome-position=13.607675   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:50, 14 January 2021

Gene SJ14637

  • transcription-direction:
    • negative
  • right-end-position:
    • 68925
  • left-end-position:
    • 63378
  • centisome-position:
    • 20.35757

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6760
    • 1 reactions found over 5 reactions in the full pathway