Difference between revisions of "SJ13173"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9406 CPD-9406] == * common-name: ** (2s)-ethylmalonyl-coa * smiles: ** ccc(c(sccnc(=o)ccnc(...")
 
(Created page with "Category:gene == Gene SJ13173 == * transcription-direction: ** positive * right-end-position: ** 179538 * left-end-position: ** 157366 * centisome-position: ** 45.63185...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9406 CPD-9406] ==
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== Gene SJ13173 ==
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* common-name:
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* transcription-direction:
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** (2s)-ethylmalonyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccc(c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)c([o-])=o
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** 179538
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* inchi-key:
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* left-end-position:
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** vugzqvcbbbezqe-uqcjfraesa-i
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** 157366
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* molecular-weight:
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* centisome-position:
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** 876.595
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** 45.63185   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13029]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13029]]
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* [[SAICARSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(2s)-ethylmalonyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=vugzqvcbbbezqe-uqcjfraesa-i}}
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** Category: [[orthology]]
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{{#set: molecular-weight=876.595}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6124]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6123]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7234]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=179538}}
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{{#set: left-end-position=157366}}
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{{#set: centisome-position=45.63185    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:03, 18 March 2021

Gene SJ13173

  • transcription-direction:
    • positive
  • right-end-position:
    • 179538
  • left-end-position:
    • 157366
  • centisome-position:
    • 45.63185

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6123
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7234
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13173&oldid=132774"