Difference between revisions of "SJ13174"

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(Created page with "Category:gene == Gene SJ08601 == * transcription-direction: ** negative * right-end-position: ** 712921 * left-end-position: ** 674134 * centisome-position: ** 78.49501...")
(Created page with "Category:gene == Gene SJ02842 == * transcription-direction: ** positive * right-end-position: ** 366689 * left-end-position: ** 359797 * centisome-position: ** 67.500206...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08601 ==
+
== Gene SJ02842 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 712921
+
** 366689
 
* left-end-position:
 
* left-end-position:
−
** 674134
+
** 359797
 
* centisome-position:
 
* centisome-position:
−
** 78.49501    
+
** 67.500206    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETATE--COA-LIGASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ADOMET-DMK-METHYLTRANSFER-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11046]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11754]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14177]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9191]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9205]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9220]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9227]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9235]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9242]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9361]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9362]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9363]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-54]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-161]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6708]]
−
* [[PWY-7118]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5870]]
−
* [[PWY66-162]]
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[MENAQUINONESYN-PWY]]
−
* [[PWY0-1313]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5839]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5844]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5849]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6672]]
+
* [[PWY-5855]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY66-21]]
+
* [[PWY-5873]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5857]]
−
{{#set: right-end-position=712921}}
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=674134}}
+
* [[PWY-5872]]
−
{{#set: centisome-position=78.49501   }}
+
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5856]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5871]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5890]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5891]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5892]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5895]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7230]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7233]]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY3O-19]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=366689}}
 +
{{#set: left-end-position=359797}}
 +
{{#set: centisome-position=67.500206   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=16}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=19}}

Revision as of 13:02, 14 January 2021

Gene SJ02842

  • transcription-direction:
    • positive
  • right-end-position:
    • 366689
  • left-end-position:
    • 359797
  • centisome-position:
    • 67.500206

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • MENAQUINONESYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5839
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5844
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5849
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5890
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5891
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5892
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5895
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over 10 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13174&oldid=81994"