Difference between revisions of "SJ13212"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7003 CPD-7003] == * common-name: ** tetrahydrogeranylgeranyl diphosphate * smiles: ** cc(=c...")
(Created page with "Category:gene == Gene SJ13212 == * transcription-direction: ** negative * right-end-position: ** 95433 * left-end-position: ** 80208 * centisome-position: ** 23.267445...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7003 CPD-7003] ==
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== Gene SJ13212 ==
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* common-name:
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* transcription-direction:
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** tetrahydrogeranylgeranyl diphosphate
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** negative
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* smiles:
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* right-end-position:
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** cc(=cccc(cccc(cccc(=ccop([o-])(=o)op([o-])(=o)[o-])c)c)c)c
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** 95433
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* inchi-key:
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* left-end-position:
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** vzbgwadxujsbti-pyddkjgssa-k
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** 80208
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* molecular-weight:
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* centisome-position:
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** 451.456
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** 23.267445   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-7659]]
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* [[S.japonica_sterols_curated]]
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* [[RXN-7660]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-7659]]
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* [[3.2.1.109-RXN]]
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* [[RXN-7660]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=tetrahydrogeranylgeranyl diphosphate}}
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* [[3.2.1.52-RXN]]
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{{#set: inchi-key=inchikey=vzbgwadxujsbti-pyddkjgssa-k}}
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** Category: [[annotation]]
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{{#set: molecular-weight=451.456}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12177]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12178]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12270]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14021]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16485]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16512]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6572]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7646]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6827]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7645]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=95433}}
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{{#set: left-end-position=80208}}
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{{#set: centisome-position=23.267445    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ13212

  • transcription-direction:
    • negative
  • right-end-position:
    • 95433
  • left-end-position:
    • 80208
  • centisome-position:
    • 23.267445

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6572
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7646
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6827
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7645
    • 1 reactions found over 2 reactions in the full pathway




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