Difference between revisions of "SJ13260"

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(Created page with "Category:gene == Gene SJ08441 == * transcription-direction: ** negative * right-end-position: ** 39029 * left-end-position: ** 19923 * centisome-position: ** 37.531082...")
(Created page with "Category:gene == Gene SJ13260 == * transcription-direction: ** positive * right-end-position: ** 277021 * left-end-position: ** 274229 * centisome-position: ** 79.82029...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08441 ==
+
== Gene SJ13260 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 39029
+
** 277021
 
* left-end-position:
 
* left-end-position:
−
** 19923
+
** 274229
 
* centisome-position:
 
* centisome-position:
−
** 37.531082    
+
** 79.82029    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.12.1-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[5.99.1.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[5.99.1.3-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ATPASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14906]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8443]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5381]]
+
* [[PWY-6545]]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7210]]
−
{{#set: right-end-position=39029}}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=19923}}
+
* [[PWY-7198]]
−
{{#set: centisome-position=37.531082   }}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7184]]
−
{{#set: nb reaction associated=4}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=277021}}
 +
{{#set: left-end-position=274229}}
 +
{{#set: centisome-position=79.82029   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:00, 18 March 2021

Gene SJ13260

  • transcription-direction:
    • positive
  • right-end-position:
    • 277021
  • left-end-position:
    • 274229
  • centisome-position:
    • 79.82029

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13260&oldid=131598"