Difference between revisions of "SJ13400"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02064 == * transcription-direction: ** positive * right-end-position: ** 110804 * left-end-position: ** 101668 * centisome-position: ** 71.279434...")
 
(Created page with "Category:gene == Gene SJ21699 == * transcription-direction: ** negative * right-end-position: ** 109182 * left-end-position: ** 105517 * centisome-position: ** 9.327825...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02064 ==
+
== Gene SJ21699 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 110804
+
** 109182
 
* left-end-position:
 
* left-end-position:
** 101668
+
** 105517
 
* centisome-position:
 
* centisome-position:
** 71.279434    
+
** 9.327825    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
+
* [[3.4.21.89-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=109182}}
== Pathway(s) associated ==
+
{{#set: left-end-position=105517}}
* [[PWY-3841]]
+
{{#set: centisome-position=9.327825   }}
** '''9''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-2201]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[1CMET2-PWY]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=110804}}
 
{{#set: left-end-position=101668}}
 
{{#set: centisome-position=71.279434   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
 

Revision as of 14:22, 26 August 2019

Gene SJ21699

  • transcription-direction:
    • negative
  • right-end-position:
    • 109182
  • left-end-position:
    • 105517
  • centisome-position:
    • 9.327825

Organism(s) associated with this gene

Reaction(s) associated