Difference between revisions of "SJ13409"

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(Created page with "Category:gene == Gene SJ09061 == * transcription-direction: ** positive * right-end-position: ** 194033 * left-end-position: ** 184487 * centisome-position: ** 43.269123...")
(Created page with "Category:gene == Gene SJ20926 == * transcription-direction: ** negative * right-end-position: ** 197260 * left-end-position: ** 194405 * centisome-position: ** 96.20248...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09061 ==
+
== Gene SJ20926 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 194033
+
** 197260
 
* left-end-position:
 
* left-end-position:
** 184487
+
** 194405
 
* centisome-position:
 
* centisome-position:
** 43.269123    
+
** 96.20248    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.5.1.42-RXN]]
+
* [[RXN1F-19]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[GPPSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-735]]
* [[PWY-6349]]
+
** '''16''' reactions found over '''19''' reactions in the full pathway
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY-6708]]
+
{{#set: right-end-position=197260}}
** '''5''' reactions found over '''8''' reactions in the full pathway
+
{{#set: left-end-position=194405}}
* [[PWY-5870]]
+
{{#set: centisome-position=96.20248   }}
** '''4''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6383]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7410]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7102]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6859]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7736]]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5122]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-7141]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7659]]
 
** '''1''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7709]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5123]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7182]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=194033}}
 
{{#set: left-end-position=184487}}
 
{{#set: centisome-position=43.269123   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:48, 14 January 2021

Gene SJ20926

  • transcription-direction:
    • negative
  • right-end-position:
    • 197260
  • left-end-position:
    • 194405
  • centisome-position:
    • 96.20248

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway