Difference between revisions of "SJ13439"

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(Created page with "Category:gene == Gene SJ20639 == * transcription-direction: ** positive * right-end-position: ** 389712 * left-end-position: ** 377072 * centisome-position: ** 61.156994...")
 
(Created page with "Category:gene == Gene SJ10098 == * transcription-direction: ** positive * right-end-position: ** 316574 * left-end-position: ** 267345 * centisome-position: ** 67.143265...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20639 ==
+
== Gene SJ10098 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 389712
+
** 316574
 
* left-end-position:
 
* left-end-position:
−
** 377072
+
** 267345
 
* centisome-position:
 
* centisome-position:
−
** 61.156994    
+
** 67.143265    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGSUCCINLYA-RXN]]
+
* [[2.7.1.68-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-22]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ARGSYN-PWY]]
+
* [[PWY-6352]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-4983]]
+
* [[PWY-6351]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4984]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=389712}}
+
{{#set: right-end-position=316574}}
−
{{#set: left-end-position=377072}}
+
{{#set: left-end-position=267345}}
−
{{#set: centisome-position=61.156994   }}
+
{{#set: centisome-position=67.143265   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=2}}

Revision as of 14:21, 26 August 2019

Gene SJ10098

  • transcription-direction:
    • positive
  • right-end-position:
    • 316574
  • left-end-position:
    • 267345
  • centisome-position:
    • 67.143265

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6352
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6351
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13439&oldid=17283"