Difference between revisions of "SJ13440"

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(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...")
 
(Created page with "Category:gene == Gene SJ07557 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04728 ==
+
== Gene SJ07557 ==
−
* transcription-direction:
 
−
** positive
 
−
* right-end-position:
 
−
** 315846
 
−
* left-end-position:
 
−
** 308870
 
−
* centisome-position:
 
−
** 61.02703   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSACETYLTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[annotation]]
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-113]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-115]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-171]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-527]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-602]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-6550]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7648]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7775]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7922]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8450]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-162]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-163]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-165]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-167]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-168]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-93]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-5482]]
+
* [[PWY1F-FLAVSYN]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1312]]
+
* [[PWY-6787]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[P122-PWY]]
+
* [[PWY-102]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''4''' reactions found over '''11''' reactions in the full pathway
−
* [[P163-PWY]]
+
* [[PWY-5390]]
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5485]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[FERMENTATION-PWY]]
+
* [[PWY-3101]]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[P3-PWY]]
+
* [[PWY-5059]]
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY4LZ-257]]
+
* [[PWY1F-823]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[METH-ACETATE-PWY]]
+
* [[PWY-5152]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-1281]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6637]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P161-PWY]]
 
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5497]]
+
* [[PWY-5391]]
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5070]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5035]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
</div>
 
</div>
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=315846}}
 
−
{{#set: left-end-position=308870}}
 
−
{{#set: centisome-position=61.02703    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=17}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=11}}

Revision as of 14:21, 26 August 2019

Gene SJ07557

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-102
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5390
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 4 reactions in the full pathway
  • PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5152
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5391
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5070
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5035
    • 2 reactions found over 7 reactions in the full pathway


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