Difference between revisions of "SJ13451"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-sn-glycero-3-phosphocholines 1-Alkyl-sn-glycero-3-phosphocholines] == * common-name: **...")
(Created page with "Category:gene == Gene SJ13451 == * transcription-direction: ** positive * right-end-position: ** 491930 * left-end-position: ** 476277 * centisome-position: ** 65.36969...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-sn-glycero-3-phosphocholines 1-Alkyl-sn-glycero-3-phosphocholines] ==
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== Gene SJ13451 ==
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* common-name:
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* transcription-direction:
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** a 1-alkyl-2-lyso-sn-glycero-3-phosphocholine
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[2.3.1.149-RXN]]
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** 491930
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* [[2.3.1.67-RXN]]
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* left-end-position:
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== Reaction(s) known to produce the compound ==
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** 476277
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* [[2.3.1.149-RXN]]
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* centisome-position:
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* [[2.3.1.67-RXN]]
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** 65.36969   
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* [[3.1.1.47-RXN]]
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== Organism(s) associated with this gene  ==
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== Reaction(s) of unknown directionality ==
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* [[S.japonica_carotenoid_curated]]
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{{#set: common-name=a 1-alkyl-2-lyso-sn-glycero-3-phosphocholine}}
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PEPDEPHOS-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14117]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14192]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14207]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-2221]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7383]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6901]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6142]]
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** '''10''' reactions found over '''13''' reactions in the full pathway
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* [[NPGLUCAT-PWY]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[P124-PWY]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-1042]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[P341-PWY]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7003]]
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** '''8''' reactions found over '''6''' reactions in the full pathway
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* [[FERMENTATION-PWY]]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6886]]
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** '''8''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7218]]
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** '''7''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5723]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=491930}}
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{{#set: left-end-position=476277}}
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{{#set: centisome-position=65.36969    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=17}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13451

  • transcription-direction:
    • positive
  • right-end-position:
    • 491930
  • left-end-position:
    • 476277
  • centisome-position:
    • 65.36969

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7383
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • NPGLUCAT-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13451&oldid=132715"