Difference between revisions of "SJ13454"

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(Created page with "Category:gene == Gene SJ15872 == * transcription-direction: ** negative * right-end-position: ** 274782 * left-end-position: ** 272022 * centisome-position: ** 93.68955...")
(Created page with "Category:gene == Gene SJ16402 == * transcription-direction: ** positive * right-end-position: ** 8067 * left-end-position: ** 54 * centisome-position: ** 1.911741300e-2 ==...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15872 ==
+
== Gene SJ16402 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 274782
+
** 8067
 
* left-end-position:
 
* left-end-position:
−
** 272022
+
** 54
 
* centisome-position:
 
* centisome-position:
−
** 93.68955   
+
** 1.911741300e-2
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.2.1.21-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[3.2.1.39-RXN]]
−
{{#set: right-end-position=274782}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=272022}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=93.68955    }}
+
* [[RXN-10769]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10773]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13602]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13603]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14179]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5341]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8036]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9674]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6788]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7091]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7092]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3121]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5176]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6002]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=8067}}
 +
{{#set: left-end-position=54}}
 +
{{#set: centisome-position=1.911741300e-2}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=10}}
 +
{{#set: nb pathway associated=6}}

Revision as of 08:19, 15 March 2021

Gene SJ16402

  • transcription-direction:
    • positive
  • right-end-position:
    • 8067
  • left-end-position:
    • 54
  • centisome-position:
    • 1.911741300e-2

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7091
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7092
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3121
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5176
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6002
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13454&oldid=121500"