Difference between revisions of "SJ13454"

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(Created page with "Category:gene == Gene SJ00780 == * transcription-direction: ** positive * right-end-position: ** 42185 * left-end-position: ** 15261 * centisome-position: ** 9.450237...")
(Created page with "Category:gene == Gene SJ13454 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * TRNA-PSEUDOURIDINE-SYNTH...")
 
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ00780 ==
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== Gene SJ13454 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 42185
 
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* left-end-position:
 
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** 15261
 
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* centisome-position:
 
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** 9.450237   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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* [[1.2.1.18-RXN]]
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[1.2.1.27-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11213]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** Category: [[annotation]]
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{{#set: nb reaction associated=1}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-2902]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-9958]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-5642]]
 
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** '''1''' reactions found over '''7''' reactions in the full pathway
 
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* [[VALDEG-PWY]]
 
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
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* [[BETA-ALA-DEGRADATION-I-PWY]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7574]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[P562-PWY]]
 
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** '''2''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-1781]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6373]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=42185}}
 
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{{#set: left-end-position=15261}}
 
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{{#set: centisome-position=9.450237    }}
 
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{{#set: organism associated=S.japonica_sterols_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ13454

Organism(s) associated with this gene

Reaction(s) associated


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13454&oldid=134516"