Difference between revisions of "SJ13454"

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(Created page with "Category:gene == Gene SJ06733 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PROTEIN-KINASE-RXN **...")
(Created page with "Category:gene == Gene SJ00780 == * transcription-direction: ** positive * right-end-position: ** 42185 * left-end-position: ** 15261 * centisome-position: ** 9.450237...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06733 ==
+
== Gene SJ00780 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 42185
 +
* left-end-position:
 +
** 15261
 +
* centisome-position:
 +
** 9.450237   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[1.2.1.18-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[1.2.1.27-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
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* [[RXN-11213]]
−
{{#set: nb reaction associated=1}}
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-2902]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9958]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-5642]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[VALDEG-PWY]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[BETA-ALA-DEGRADATION-I-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7574]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[P562-PWY]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-1781]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6373]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=42185}}
 +
{{#set: left-end-position=15261}}
 +
{{#set: centisome-position=9.450237    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=7}}

Revision as of 20:25, 18 December 2020

Gene SJ00780

  • transcription-direction:
    • positive
  • right-end-position:
    • 42185
  • left-end-position:
    • 15261
  • centisome-position:
    • 9.450237

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5642
    • 1 reactions found over 7 reactions in the full pathway
  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • BETA-ALA-DEGRADATION-I-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7574
    • 3 reactions found over 5 reactions in the full pathway
  • P562-PWY
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-1781
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6373
    • 1 reactions found over 4 reactions in the full pathway




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