Difference between revisions of "SJ13458"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13458 == * transcription-direction: ** positive * right-end-position: ** 560689 * left-end-position: ** 543287 * centisome-position: ** 74.5669...")
(Created page with "Category:gene == Gene SJ00546 == * transcription-direction: ** negative * right-end-position: ** 73042 * left-end-position: ** 65452 * centisome-position: ** 39.503162...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13458 ==
+
== Gene SJ00546 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 560689
+
** 73042
 
* left-end-position:
 
* left-end-position:
−
** 543287
+
** 65452
 
* centisome-position:
 
* centisome-position:
−
** 74.5669    
+
** 39.503162    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.13.4-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
{{#set: right-end-position=560689}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=543287}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=74.5669   }}
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=73042}}
 +
{{#set: left-end-position=65452}}
 +
{{#set: centisome-position=39.503162   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 18:48, 14 January 2021

Gene SJ00546

  • transcription-direction:
    • negative
  • right-end-position:
    • 73042
  • left-end-position:
    • 65452
  • centisome-position:
    • 39.503162

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13458&oldid=95401"