Difference between revisions of "SJ13468"

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(Created page with "Category:gene == Gene SJ01225 == * transcription-direction: ** positive * right-end-position: ** 449155 * left-end-position: ** 434760 * centisome-position: ** 78.563324...")
(Created page with "Category:gene == Gene SJ13468 == * transcription-direction: ** positive * right-end-position: ** 721472 * left-end-position: ** 708880 * centisome-position: ** 97.29478...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01225 ==
+
== Gene SJ13468 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 449155
+
** 721472
 
* left-end-position:
 
* left-end-position:
−
** 434760
+
** 708880
 
* centisome-position:
 
* centisome-position:
−
** 78.563324    
+
** 97.29478    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[QUERCETIN-23-DIOXYGENASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACOA120OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA140OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA160OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA40OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOA80OR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACYL-COA-OXIDASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACYLCOADEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10696]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10706]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10707]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11026]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12518]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12669]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14576]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14771]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14775]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14785]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14796]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16134]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17113]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6848]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* [[FAO-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-735]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7007]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7288]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5136]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6837]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6920]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7291]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7337]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7338]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7340]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7606]]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7726]]
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=449155}}
+
{{#set: right-end-position=721472}}
−
{{#set: left-end-position=434760}}
+
{{#set: left-end-position=708880}}
−
{{#set: centisome-position=78.563324   }}
+
{{#set: centisome-position=97.29478   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=22}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=14}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13468

  • transcription-direction:
    • positive
  • right-end-position:
    • 721472
  • left-end-position:
    • 708880
  • centisome-position:
    • 97.29478

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7288
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6920
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7291
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7337
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7338
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7340
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-7606
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7726
    • 8 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13468&oldid=132375"