Difference between revisions of "SJ13486"

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(Created page with "Category:gene == Gene SJ03668 == * transcription-direction: ** negative * right-end-position: ** 491696 * left-end-position: ** 477233 * centisome-position: ** 91.47003...")
(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03668 ==
+
== Gene SJ13486 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 491696
+
** 7446
 
* left-end-position:
 
* left-end-position:
−
** 477233
+
** 632
 
* centisome-position:
 
* centisome-position:
−
** 91.47003    
+
** 5.0555954    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYOHMETRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1435]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1436]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1437]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1438]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[TREHALOSE6PSYN-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN0-5234]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[TREHALOSEPHOSPHA-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWYG-321]]
−
* [[1CMET2-PWY]]
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[TRESYN-PWY]]
−
* [[PWY-5497]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
* [[PWY-7900]]
−
* [[PWY-181]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-881]]
−
* [[PWY-3661]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[TREHALOSESYN-PWY]]
−
* [[PWY-2201]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[GLYSYN-PWY]]
+
{{#set: right-end-position=7446}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: left-end-position=632}}
−
* [[PWY-3661-1]]
+
{{#set: centisome-position=5.0555954   }}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-2161]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=491696}}
 
−
{{#set: left-end-position=477233}}
 
−
{{#set: centisome-position=91.47003   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:06, 18 March 2021

Gene SJ13486

  • transcription-direction:
    • positive
  • right-end-position:
    • 7446
  • left-end-position:
    • 632
  • centisome-position:
    • 5.0555954

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13486&oldid=134200"