Difference between revisions of "SJ13486"

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(Created page with "Category:gene == Gene SJ22527 == * transcription-direction: ** positive * right-end-position: ** 131307 * left-end-position: ** 122007 * centisome-position: ** 69.65142...")
 
(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22527 ==
+
== Gene SJ13486 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 131307
+
** 7446
 
* left-end-position:
 
* left-end-position:
−
** 122007
+
** 632
 
* centisome-position:
 
* centisome-position:
−
** 69.65142    
+
** 5.0555954    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[6.3.5.6-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[6.3.5.7-RXN]]
+
* [[RXN1G-1435]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[AMIDASE-RXN]]
+
* [[RXN1G-1436]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
+
* [[RXN1G-1437]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRAZIN-RXN]]
+
* [[RXN1G-1438]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[R311-RXN]]
+
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14727]]
+
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14728]]
+
* [[TREHALOSEPHOSPHA-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17608]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNN-404]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY490-4]]
+
* [[PWYG-321]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[PWY-5921]]
+
* [[TRESYN-PWY]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7900]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[ARGDEG-V-PWY]]
+
* [[PWY-881]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7308]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5025]]
+
* [[TREHALOSESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-3161]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-581]]
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=131307}}
+
{{#set: right-end-position=7446}}
−
{{#set: left-end-position=122007}}
+
{{#set: left-end-position=632}}
−
{{#set: centisome-position=69.65142   }}
+
{{#set: centisome-position=5.0555954   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:06, 18 March 2021

Gene SJ13486

  • transcription-direction:
    • positive
  • right-end-position:
    • 7446
  • left-end-position:
    • 632
  • centisome-position:
    • 5.0555954

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13486&oldid=134200"