Difference between revisions of "SJ13486"

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(Created page with "Category:gene == Gene SJ20245 == * transcription-direction: ** negative * right-end-position: ** 162188 * left-end-position: ** 138517 * centisome-position: ** 65.80537...")
(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20245 ==
+
== Gene SJ13486 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 162188
+
** 7446
 
* left-end-position:
 
* left-end-position:
−
** 138517
+
** 632
 
* centisome-position:
 
* centisome-position:
−
** 65.80537    
+
** 5.0555954    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DLACTDEHYDROGNAD-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN1G-1435]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1436]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1437]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1438]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1439]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TREHALOSE6PSYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TREHALOSEPHOSPHA-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P122-PWY]]
+
* [[PWYG-321]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
−
* [[FERMENTATION-PWY]]
+
* [[TRESYN-PWY]]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY4LZ-257]]
+
* [[PWY-7900]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6454]]
+
* [[PWY-881]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6901]]
+
* [[TREHALOSESYN-PWY]]
−
** '''10''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[ALACAT2-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=7446}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=632}}
−
{{#set: right-end-position=162188}}
+
{{#set: centisome-position=5.0555954   }}
−
{{#set: left-end-position=138517}}
 
−
{{#set: centisome-position=65.80537   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:06, 18 March 2021

Gene SJ13486

  • transcription-direction:
    • positive
  • right-end-position:
    • 7446
  • left-end-position:
    • 632
  • centisome-position:
    • 5.0555954

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13486&oldid=134200"