Difference between revisions of "SJ13517"

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(Created page with "Category:gene == Gene SJ14704 == * transcription-direction: ** negative * right-end-position: ** 83820 * left-end-position: ** 78019 * centisome-position: ** 25.118479...")
(Created page with "Category:gene == Gene SJ13517 == * transcription-direction: ** negative * right-end-position: ** 334447 * left-end-position: ** 312179 * centisome-position: ** 93.299446...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ14704 ==
+
== Gene SJ13517 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 83820
+
** 334447
 
* left-end-position:
 
* left-end-position:
** 78019
+
** 312179
 
* centisome-position:
 
* centisome-position:
** 25.118479    
+
** 93.299446    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN]]
+
* [[3.4.22.1-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[3PGAREARR-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-6142]]
 
** '''10''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7003]]
 
** '''8''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7218]]
 
** '''7''' reactions found over '''4''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[P341-PWY]]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-5723]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[P124-PWY]]
 
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-2221]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6886]]
 
** '''8''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7124]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=83820}}
+
{{#set: right-end-position=334447}}
{{#set: left-end-position=78019}}
+
{{#set: left-end-position=312179}}
{{#set: centisome-position=25.118479   }}
+
{{#set: centisome-position=93.299446   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=14}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ13517

  • transcription-direction:
    • negative
  • right-end-position:
    • 334447
  • left-end-position:
    • 312179
  • centisome-position:
    • 93.299446

Organism(s) associated with this gene

Reaction(s) associated