Difference between revisions of "SJ13521"

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(Created page with "Category:gene == Gene SJ05457 == * transcription-direction: ** negative * right-end-position: ** 23808 * left-end-position: ** 5078 * centisome-position: ** 5.5337 ==...")
(Created page with "Category:gene == Gene SJ13521 == * transcription-direction: ** positive * right-end-position: ** 194336 * left-end-position: ** 169504 * centisome-position: ** 50.658844...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05457 ==
+
== Gene SJ13521 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 23808
+
** 194336
 
* left-end-position:
 
* left-end-position:
−
** 5078
+
** 169504
 
* centisome-position:
 
* centisome-position:
−
** 5.5337    
+
** 50.658844    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HEMN-RXN]]
+
* [[DNA-LIGASE-ATP-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-1461]]
+
* [[RXN-17917]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17918]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17919]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
−
* [[HEMESYN2-PWY]]
+
{{#set: right-end-position=194336}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=169504}}
−
* [[PWY-5531]]
+
{{#set: centisome-position=50.658844   }}
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY0-1415]]
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7159]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=23808}}
 
−
{{#set: left-end-position=5078}}
 
−
{{#set: centisome-position=5.5337   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:01, 18 March 2021

Gene SJ13521

  • transcription-direction:
    • positive
  • right-end-position:
    • 194336
  • left-end-position:
    • 169504
  • centisome-position:
    • 50.658844

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13521&oldid=131838"