Difference between revisions of "SJ13526"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7221 CPD-7221] == * common-name: ** (3z)-dodec-3-enoyl-coa * smiles: ** ccccccccc=ccc(sccnc...")
(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7221 CPD-7221] ==
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== Gene SJ13526 ==
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* common-name:
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* transcription-direction:
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** (3z)-dodec-3-enoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccccccccc=ccc(sccnc(ccnc(c(c(cop(op(occ3(c(op(=o)([o-])[o-])c(o)c(n2(c1(n=cn=c(n)c=1n=c2)))o3))(=o)[o-])(=o)[o-])(c)c)o)=o)=o)=o
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** 196015
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* inchi-key:
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* left-end-position:
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** xemivmktvgrftd-qxmhvhedsa-j
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** 189101
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* molecular-weight:
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* centisome-position:
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** 943.792
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** 56.583523   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-7931]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-14394]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-7931]]
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* [[1.2.1.2-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(3z)-dodec-3-enoyl-coa}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=xemivmktvgrftd-qxmhvhedsa-j}}
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* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
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{{#set: molecular-weight=943.792}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[KETOGLUTREDUCT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PGLYCDEHYDROG-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-16701]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-1881]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5497]]
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** '''10''' reactions found over '''24''' reactions in the full pathway
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* [[P164-PWY]]
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-6696]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-1622]]
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** '''6''' reactions found over '''13''' reactions in the full pathway
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* [[P162-PWY]]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[SERSYN-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=196015}}
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{{#set: left-end-position=189101}}
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{{#set: centisome-position=56.583523    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13526

  • transcription-direction:
    • negative
  • right-end-position:
    • 196015
  • left-end-position:
    • 189101
  • centisome-position:
    • 56.583523

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1881
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6696
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-1622
    • 6 reactions found over 13 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13526&oldid=132643"