Difference between revisions of "SJ13526"

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(Created page with "Category:gene == Gene SJ08856 == * transcription-direction: ** positive * right-end-position: ** 32704 * left-end-position: ** 17301 * centisome-position: ** 36.001 ==...")
(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08856 ==
+
== Gene SJ13526 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 32704
+
** 196015
 
* left-end-position:
 
* left-end-position:
−
** 17301
+
** 189101
 
* centisome-position:
 
* centisome-position:
−
** 36.001    
+
** 56.583523    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATP-ADENYLYLTRANSFERASE-RXN]]
+
* [[1.2.1.2-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
−
* [[DCTP-PYROPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DUTP-PYROP-RXN]]
+
* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
+
* [[KETOGLUTREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14139]]
+
* [[PGLYCDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14140]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-16701]]
−
* [[RXN0-383]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-385]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5107]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SULFATE-ADENYLYLTRANSFERASE-ADP-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7206]]
+
* [[PWY-1881]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7187]]
+
* [[PWY-5497]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
* [[PWY0-166]]
+
* [[P164-PWY]]
−
** '''14''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6696]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-1622]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7821]]
+
* [[P162-PWY]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5279]]
+
* [[SERSYN-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=32704}}
+
{{#set: right-end-position=196015}}
−
{{#set: left-end-position=17301}}
+
{{#set: left-end-position=189101}}
−
{{#set: centisome-position=36.001   }}
+
{{#set: centisome-position=56.583523   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=6}}
 
{{#set: nb pathway associated=7}}
 
{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13526

  • transcription-direction:
    • negative
  • right-end-position:
    • 196015
  • left-end-position:
    • 189101
  • centisome-position:
    • 56.583523

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1881
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6696
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-1622
    • 6 reactions found over 13 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13526&oldid=132643"