Difference between revisions of "SJ13526"

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(Created page with "Category:gene == Gene SJ13673 == * transcription-direction: ** positive * right-end-position: ** 229157 * left-end-position: ** 193608 * centisome-position: ** 14.609675...")
(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13673 ==
+
== Gene SJ13526 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 229157
+
** 196015
 
* left-end-position:
 
* left-end-position:
−
** 193608
+
** 189101
 
* centisome-position:
 
* centisome-position:
−
** 14.609675    
+
** 56.583523    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15559]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.2.1.2-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15560]]
+
* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[KETOGLUTREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PGLYCDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16701]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[PWY-1881]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5497]]
−
{{#set: right-end-position=229157}}
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
{{#set: left-end-position=193608}}
+
* [[P164-PWY]]
−
{{#set: centisome-position=14.609675   }}
+
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6696]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-1622]]
 +
** '''6''' reactions found over '''13''' reactions in the full pathway
 +
* [[P162-PWY]]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[SERSYN-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=196015}}
 +
{{#set: left-end-position=189101}}
 +
{{#set: centisome-position=56.583523   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13526

  • transcription-direction:
    • negative
  • right-end-position:
    • 196015
  • left-end-position:
    • 189101
  • centisome-position:
    • 56.583523

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1881
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6696
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-1622
    • 6 reactions found over 13 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13526&oldid=132643"