Difference between revisions of "SJ13526"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7221 CPD-7221] == * common-name: ** (3z)-dodec-3-enoyl-coa * smiles: ** ccccccccc=ccc(sccnc...") |
(Created page with "Category:gene == Gene SJ13526 == * transcription-direction: ** negative * right-end-position: ** 196015 * left-end-position: ** 189101 * centisome-position: ** 56.583523...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene SJ13526 == |
− | * | + | * transcription-direction: |
− | ** | + | ** negative |
− | * | + | * right-end-position: |
− | ** | + | ** 196015 |
− | * | + | * left-end-position: |
− | ** | + | ** 189101 |
− | * | + | * centisome-position: |
− | ** | + | ** 56.583523 |
− | == | + | == Organism(s) associated with this gene == |
− | * [[ | + | * [[S.japonica_carotenoid_curated]] |
− | + | == Reaction(s) associated == | |
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | * [[ | + | * [[1.2.1.2-RXN]] |
− | + | ** Category: [[orthology]] | |
− | {{#set: | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
− | {{#set: | + | * [[GLYOXYLATE-REDUCTASE-NADP+-RXN]] |
− | {{#set: | + | ** Category: [[annotation]] |
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[HYDROXYPYRUVATE-REDUCTASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[KETOGLUTREDUCT-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[PGLYCDEHYDROG-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-16701]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY-1881]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5497]] | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[P164-PWY]] | ||
+ | ** '''6''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-6696]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-1622]] | ||
+ | ** '''6''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[P162-PWY]] | ||
+ | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[SERSYN-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=196015}} | ||
+ | {{#set: left-end-position=189101}} | ||
+ | {{#set: centisome-position=56.583523 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=6}} | ||
+ | {{#set: nb pathway associated=7}} |
Latest revision as of 11:02, 18 March 2021
Contents
Gene SJ13526
- transcription-direction:
- negative
- right-end-position:
- 196015
- left-end-position:
- 189101
- centisome-position:
- 56.583523
Organism(s) associated with this gene
Reaction(s) associated
- 1.2.1.2-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- GLYOXYLATE-REDUCTASE-NADP+-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HYDROXYPYRUVATE-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- KETOGLUTREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PGLYCDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16701
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-1881
- 1 reactions found over 1 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- P164-PWY
- 6 reactions found over 15 reactions in the full pathway
- PWY-6696
- 1 reactions found over 5 reactions in the full pathway
- PWY-1622
- 6 reactions found over 13 reactions in the full pathway
- P162-PWY
- 7 reactions found over 10 reactions in the full pathway
- SERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway