Difference between revisions of "SJ13561"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-195 CPD-195] == * common-name: ** octanoate * smiles: ** cccccccc(=o)[o-] * inchi-key: ** w...")
(Created page with "Category:gene == Gene SJ03316 == * transcription-direction: ** positive * right-end-position: ** 429842 * left-end-position: ** 410570 * centisome-position: ** 78.01997...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-195 CPD-195] ==
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== Gene SJ03316 ==
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* common-name:
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* transcription-direction:
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** octanoate
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** positive
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* smiles:
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* right-end-position:
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** cccccccc(=o)[o-]
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** 429842
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* inchi-key:
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* left-end-position:
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** wwzkqhockizlma-uhfffaoysa-m
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** 410570
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* molecular-weight:
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* centisome-position:
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** 143.205
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** 78.01997   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[R223-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[RXN0-5098]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[3.1.2.19-RXN-CPD-196/WATER//CPD-195/CO-A/PROTON.35.]]
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* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
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* [[ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33.]]
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** Category: [[annotation]]
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* [[R222-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[THIOESTER-RXN[CCO-CYTOSOL]-CPD-196/WATER//CPD-195/CO-A/PROTON.48.]]
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* [[LIPOXYGENASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=octanoate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=wwzkqhockizlma-uhfffaoysa-m}}
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* [[RXN-1321]]
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{{#set: molecular-weight=143.205}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-13395]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8497]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8647]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY66-375]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5410]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5409]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-735]]
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** '''16''' reactions found over '''19''' reactions in the full pathway
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* [[PWY66-392]]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6917]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5406]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5407]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5408]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=429842}}
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{{#set: left-end-position=410570}}
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{{#set: centisome-position=78.01997    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=9}}

Revision as of 20:20, 18 December 2020

Gene SJ03316

  • transcription-direction:
    • positive
  • right-end-position:
    • 429842
  • left-end-position:
    • 410570
  • centisome-position:
    • 78.01997

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5409
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY66-392
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




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