Difference between revisions of "SJ13575"

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(Created page with "Category:gene == Gene SJ00477 == * transcription-direction: ** positive * right-end-position: ** 52682 * left-end-position: ** 50485 * centisome-position: ** 30.306213...")
 
(Created page with "Category:gene == Gene SJ17565 == * transcription-direction: ** negative * right-end-position: ** 195088 * left-end-position: ** 183911 * centisome-position: ** 71.06353...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00477 ==
+
== Gene SJ17565 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 52682
+
** 195088
 
* left-end-position:
 
* left-end-position:
** 50485
+
** 183911
 
* centisome-position:
 
* centisome-position:
** 30.306213    
+
** 71.06353    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ATPASE-RXN]]
+
* [[2.1.1.100-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN-11135]]
+
{{#set: right-end-position=195088}}
** Category: [[annotation]]
+
{{#set: left-end-position=183911}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=71.06353   }}
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=52682}}
 
{{#set: left-end-position=50485}}
 
{{#set: centisome-position=30.306213   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
 

Revision as of 14:22, 26 August 2019

Gene SJ17565

  • transcription-direction:
    • negative
  • right-end-position:
    • 195088
  • left-end-position:
    • 183911
  • centisome-position:
    • 71.06353

Organism(s) associated with this gene

Reaction(s) associated