Difference between revisions of "SJ13593"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17492 CPD-17492] == * common-name: ** (r)-2-hydroxy-4-methylpentanoate * smiles: ** cc(c)cc...")
(Created page with "Category:gene == Gene SJ11043 == * transcription-direction: ** negative * right-end-position: ** 406741 * left-end-position: ** 380320 * centisome-position: ** 48.42034...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17492 CPD-17492] ==
+
== Gene SJ11043 ==
−
* common-name:
+
* transcription-direction:
−
** (r)-2-hydroxy-4-methylpentanoate
+
** negative
−
* smiles:
+
* right-end-position:
−
** cc(c)cc(c([o-])=o)o
+
** 406741
−
* inchi-key:
+
* left-end-position:
−
** lvrftazaxqpqhi-rxmqykedsa-m
+
** 380320
−
* molecular-weight:
+
* centisome-position:
−
** 131.151
+
** 48.42034   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
== Reaction(s) known to produce the compound ==
+
* [[S.japonica_sterols_curated]]
−
* [[RXN-17525]]
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
* [[ATPASE-RXN]]
−
{{#set: common-name=(r)-2-hydroxy-4-methylpentanoate}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=lvrftazaxqpqhi-rxmqykedsa-m}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=131.151}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=406741}}
 +
{{#set: left-end-position=380320}}
 +
{{#set: centisome-position=48.42034    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:22, 18 December 2020

Gene SJ11043

  • transcription-direction:
    • negative
  • right-end-position:
    • 406741
  • left-end-position:
    • 380320
  • centisome-position:
    • 48.42034

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13593&oldid=42013"