Difference between revisions of "SJ13608"
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(Created page with "Category:gene == Gene SJ16195 == * transcription-direction: ** negative * right-end-position: ** 139212 * left-end-position: ** 132198 * centisome-position: ** 46.189003...") |
(Created page with "Category:gene == Gene SJ13608 == * transcription-direction: ** positive * right-end-position: ** 186273 * left-end-position: ** 176539 * centisome-position: ** 52.994503...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13608 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 186273 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 176539 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 52.994503 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.151-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-1225]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-18302]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[PWY-7434]] |
| − | {{#set: left-end-position= | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-401]] |
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7666]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7840]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=186273}} | ||
| + | {{#set: left-end-position=176539}} | ||
| + | {{#set: centisome-position=52.994503 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=4}} | ||
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ13608
- transcription-direction:
- positive
- right-end-position:
- 186273
- left-end-position:
- 176539
- centisome-position:
- 52.994503
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.151-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1225
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-18302
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-401
- 2 reactions found over 5 reactions in the full pathway
- PWY-7666
- 1 reactions found over 3 reactions in the full pathway
- PWY-7840
- 3 reactions found over 5 reactions in the full pathway
