Difference between revisions of "SJ13629"

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(Created page with "Category:gene == Gene SJ00160 == * transcription-direction: ** positive * right-end-position: ** 155772 * left-end-position: ** 146195 * centisome-position: ** 85.607796...")
(Created page with "Category:gene == Gene SJ22245 == * transcription-direction: ** negative * right-end-position: ** 55108 * left-end-position: ** 36769 * centisome-position: ** 20.546965...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00160 ==
+
== Gene SJ22245 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 155772
+
** 55108
 
* left-end-position:
 
* left-end-position:
−
** 146195
+
** 36769
 
* centisome-position:
 
* centisome-position:
−
** 85.607796    
+
** 20.546965    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.1.127-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2.7.1.140-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[2.7.1.151-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[2.7.1.152-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-10948]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10971]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10972]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10974]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13197]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7162]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7163]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7184]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7186]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-6362]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6364]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6361]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-6372]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6554]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6365]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6366]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6369]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-4661]]
−
{{#set: right-end-position=155772}}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=146195}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=85.607796   }}
+
{{#set: right-end-position=55108}}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: left-end-position=36769}}
−
{{#set: nb reaction associated=5}}
+
{{#set: centisome-position=20.546965   }}
−
{{#set: nb pathway associated=4}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=13}}
 +
{{#set: nb pathway associated=9}}

Revision as of 20:26, 18 December 2020

Gene SJ22245

  • transcription-direction:
    • negative
  • right-end-position:
    • 55108
  • left-end-position:
    • 36769
  • centisome-position:
    • 20.546965

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6361
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6372
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6554
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6365
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6366
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6369
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-4661
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13629&oldid=43994"