Difference between revisions of "SJ13697"

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(Created page with "Category:gene == Gene SJ08366 == * transcription-direction: ** negative * right-end-position: ** 53537 * left-end-position: ** 30863 * centisome-position: ** 56.80969...")
(Created page with "Category:gene == Gene SJ09093 == * transcription-direction: ** positive * right-end-position: ** 81886 * left-end-position: ** 66346 * centisome-position: ** 15.569282...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ08366 ==
+
== Gene SJ09093 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 53537
+
** 81886
 
* left-end-position:
 
* left-end-position:
** 30863
+
** 66346
 
* centisome-position:
 
* centisome-position:
** 56.80969    
+
** 15.569282    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.6.4.4-RXN]]
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[CARBOXYLESTERASE-RXN]]
+
* [[THIOREDOXIN-REDUCT-NADPH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PROLINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10711]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRNA-CHARGING-PWY]]
+
* [[THIOREDOX-PWY]]
** '''21''' reactions found over '''21''' reactions in the full pathway
 
* [[PWY-6303]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
* [[PWY-6857]]
+
{{#set: transcription-direction=positive}}
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=81886}}
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=66346}}
{{#set: right-end-position=53537}}
+
{{#set: centisome-position=15.569282   }}
{{#set: left-end-position=30863}}
 
{{#set: centisome-position=56.80969   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 15:23, 5 January 2021

Gene SJ09093

  • transcription-direction:
    • positive
  • right-end-position:
    • 81886
  • left-end-position:
    • 66346
  • centisome-position:
    • 15.569282

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • THIOREDOX-PWY
    • 1 reactions found over 2 reactions in the full pathway