Difference between revisions of "SJ13715"
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(Created page with "Category:gene == Gene SJ17313 == * transcription-direction: ** negative * right-end-position: ** 202232 * left-end-position: ** 200697 * centisome-position: ** 75.72357...") |
(Created page with "Category:gene == Gene SJ13715 == * transcription-direction: ** negative * right-end-position: ** 1015288 * left-end-position: ** 990437 * centisome-position: ** 74.73846...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13715 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 1015288 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 990437 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 74.73846 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[1.10.2.2-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN | + | * [[3.4.24.64-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-14107]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15816]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15829]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-3781]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7279]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7082]] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-6692]] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=1015288}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=990437}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=74.73846 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=5}} | {{#set: nb reaction associated=5}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ13715
- transcription-direction:
- negative
- right-end-position:
- 1015288
- left-end-position:
- 990437
- centisome-position:
- 74.73846
Organism(s) associated with this gene
Reaction(s) associated
- 1.10.2.2-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 3.4.24.64-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-14107
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15816
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15829
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3781
- 4 reactions found over 4 reactions in the full pathway
- PWY-7279
- 4 reactions found over 4 reactions in the full pathway
- PWY-7082
- 1 reactions found over 2 reactions in the full pathway
- PWY-6692
- 3 reactions found over 6 reactions in the full pathway
