Difference between revisions of "SJ13718"

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(Created page with "Category:gene == Gene SJ18541 == * transcription-direction: ** positive * right-end-position: ** 145855 * left-end-position: ** 135008 * centisome-position: ** 55.630047...")
 
(Created page with "Category:gene == Gene SJ13718 == * transcription-direction: ** negative * right-end-position: ** 1061238 * left-end-position: ** 1045501 * centisome-position: ** 78.89360...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18541 ==
+
== Gene SJ13718 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 145855
+
** 1061238
 
* left-end-position:
 
* left-end-position:
−
** 135008
+
** 1045501
 
* centisome-position:
 
* centisome-position:
−
** 55.630047    
+
** 78.89360    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CYTOCHROME-B5-REDUCTASE-RXN]]
−
* [[ASPCARBTRANS-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ORNCARBAMTRANSFER-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13482]]
+
* [[RXN-11195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-9]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=1061238}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=1045501}}
−
</div>
+
{{#set: centisome-position=78.89360   }}
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-5686]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7790]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7791]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4984]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[CITRULLINE-DEG-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYN-PWY]]
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-4981]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=145855}}
 
−
{{#set: left-end-position=135008}}
 
−
{{#set: centisome-position=55.630047   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=11}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ13718

  • transcription-direction:
    • negative
  • right-end-position:
    • 1061238
  • left-end-position:
    • 1045501
  • centisome-position:
    • 78.89360

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13718&oldid=134077"