Difference between revisions of "SJ13727"

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(Created page with "Category:gene == Gene SJ07066 == * transcription-direction: ** positive * right-end-position: ** 180256 * left-end-position: ** 177130 * centisome-position: ** 38.146286...")
(Created page with "Category:gene == Gene SJ13727 == * transcription-direction: ** negative * right-end-position: ** 1234228 * left-end-position: ** 1221708 * centisome-position: ** 92.190186...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07066 ==
+
== Gene SJ13727 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 180256
+
** 1234228
 
* left-end-position:
 
* left-end-position:
−
** 177130
+
** 1221708
 
* centisome-position:
 
* centisome-position:
−
** 38.146286    
+
** 92.190186    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DOLICHYLDIPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=1234228}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=1221708}}
−
* [[RXN-16030]]
+
{{#set: centisome-position=92.190186   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16121]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17730]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[TRIGLSYN-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6453]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7782]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=180256}}
 
−
{{#set: left-end-position=177130}}
 
−
{{#set: centisome-position=38.146286   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ13727

  • transcription-direction:
    • negative
  • right-end-position:
    • 1234228
  • left-end-position:
    • 1221708
  • centisome-position:
    • 92.190186

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13727&oldid=134453"