Difference between revisions of "SJ13774"

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(Created page with "Category:gene == Gene SJ17484 == * transcription-direction: ** negative * right-end-position: ** 53187 * left-end-position: ** 44448 * centisome-position: ** 16.981218...")
(Created page with "Category:gene == Gene SJ17998 == * transcription-direction: ** negative * right-end-position: ** 289384 * left-end-position: ** 286529 * centisome-position: ** 43.649654...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17484 ==
+
== Gene SJ17998 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 53187
+
** 289384
 
* left-end-position:
 
* left-end-position:
** 44448
+
** 286529
 
* centisome-position:
 
* centisome-position:
** 16.981218    
+
** 43.649654    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[FUMARATE-REDUCTASE-NADH-RXN]]
+
* [[2.4.1.198-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-14971]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-15378]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6558]]
* [[PWY-6969]]
+
** '''7''' reactions found over '''13''' reactions in the full pathway
** '''10''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5690]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[P105-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[TCA]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7254]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-561]]
 
** '''6''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6728]]
 
** '''11''' reactions found over '''19''' reactions in the full pathway
 
* [[PWY0-1353]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-3781]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7279]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY66-398]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-4302]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY0-1329]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=53187}}
+
{{#set: right-end-position=289384}}
{{#set: left-end-position=44448}}
+
{{#set: left-end-position=286529}}
{{#set: centisome-position=16.981218   }}
+
{{#set: centisome-position=43.649654   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=1}}

Revision as of 15:23, 5 January 2021

Gene SJ17998

  • transcription-direction:
    • negative
  • right-end-position:
    • 289384
  • left-end-position:
    • 286529
  • centisome-position:
    • 43.649654

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway