Difference between revisions of "SJ13833"

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(Created page with "Category:gene == Gene SJ00224 == * transcription-direction: ** positive * right-end-position: ** 510036 * left-end-position: ** 486161 * centisome-position: ** 85.33542...")
(Created page with "Category:gene == Gene SJ04484 == * transcription-direction: ** negative * right-end-position: ** 59468 * left-end-position: ** 50621 * centisome-position: ** 47.60834...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00224 ==
+
== Gene SJ04484 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 510036
+
** 59468
 
* left-end-position:
 
* left-end-position:
** 486161
+
** 50621
 
* centisome-position:
 
* centisome-position:
** 85.33542    
+
** 47.60834    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-15559]]
+
* [[RXN-11840]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-15560]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
== Pathway(s) associated ==
+
{{#set: right-end-position=59468}}
* [[PWY-7511]]
+
{{#set: left-end-position=50621}}
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=47.60834   }}
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=510036}}
 
{{#set: left-end-position=486161}}
 
{{#set: centisome-position=85.33542   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=1}}
 

Revision as of 08:15, 15 March 2021

Gene SJ04484

  • transcription-direction:
    • negative
  • right-end-position:
    • 59468
  • left-end-position:
    • 50621
  • centisome-position:
    • 47.60834

Organism(s) associated with this gene

Reaction(s) associated