Difference between revisions of "SJ13840"

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(Created page with "Category:gene == Gene SJ11349 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
(Created page with "Category:gene == Gene SJ13840 == * transcription-direction: ** positive * right-end-position: ** 82023 * left-end-position: ** 51406 * centisome-position: ** 15.583431...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11349 ==
+
== Gene SJ13840 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 82023
 +
* left-end-position:
 +
** 51406
 +
* centisome-position:
 +
** 15.583431   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-15559]]
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* [[1.14.13.78-RXN]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15560]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-1121]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12510]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-3661]]
 
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** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-5242]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7580]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7651]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
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* [[PWY-5047]]
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* [[PWY-7511]]
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** '''6''' reactions found over '''15''' reactions in the full pathway
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5034]]
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{{#set: transcription-direction=positive}}
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** '''6''' reactions found over '''6''' reactions in the full pathway
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{{#set: right-end-position=82023}}
−
* [[PWY-2181]]
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{{#set: left-end-position=51406}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: centisome-position=15.583431    }}
−
* [[PWY-3101]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5640]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5060]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY1F-467]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:10, 18 March 2021

Gene SJ13840

  • transcription-direction:
    • positive
  • right-end-position:
    • 82023
  • left-end-position:
    • 51406
  • centisome-position:
    • 15.583431

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13840&oldid=136225"