Difference between revisions of "SJ13884"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLN GLN] == * common-name: ** l-glutamine * smiles: ** c(=o)(n)ccc([n+])c([o-])=o * inchi-key:...")
 
(Created page with "Category:gene == Gene SJ13884 == * transcription-direction: ** positive * right-end-position: ** 191335 * left-end-position: ** 172621 * centisome-position: ** 52.38336...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLN GLN] ==
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== Gene SJ13884 ==
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* common-name:
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* transcription-direction:
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** l-glutamine
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** positive
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* smiles:
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* right-end-position:
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** c(=o)(n)ccc([n+])c([o-])=o
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** 191335
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* inchi-key:
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* left-end-position:
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** zdxpyrjpndtmrx-vkhmyheasa-n
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** 172621
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* molecular-weight:
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* centisome-position:
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** 146.146
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** 52.38336   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[2.6.1.64-RXN]]
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* [[3.6.4.5-RXN]]
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* [[6.3.5.6-RXN]]
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** Category: [[annotation]]
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* [[6.3.5.7-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ANTHRANSYN-RXN]]
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* [[ATPASE-RXN]]
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* [[ASNSYNB-RXN]]
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** Category: [[annotation]]
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* [[CARBPSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CTPSYN-RXN]]
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** Category: [[orthology]]
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* [[FGAMSYN-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
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** Category: [[annotation]]
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* [[GLUTAMATESYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLUTAMIDOTRANS-RXN]]
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** Category: [[orthology]]
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* [[GLUTAMIN-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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* [[RXN-12195]]
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* [[GMP-SYN-GLUT-RXN]]
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** Category: [[annotation]]
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NAD-SYNTH-GLN-RXN]]
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** Category: [[orthology]]
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* [[PABASYN-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PRPPAMIDOTRANS-RXN]]
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* [[RXN-12196]]
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* [[RXN-11322]]
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** Category: [[annotation]]
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* [[biomass_rxn]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
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== Reaction(s) known to produce the compound ==
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== Pathway(s) associated ==
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* [[2.6.1.64-RXN]]
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* [[PWY-6545]]
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* [[ANTHRANSYN-RXN]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTAMINESYN-RXN]]
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* [[PWY-7210]]
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PABASYN-RXN]]
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* [[PWY-7198]]
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* [[PRPPAMIDOTRANS-RXN]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[RXN0-6976]]
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* [[PWY-7184]]
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* [[RXN0-6983]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reaction(s) of unknown directionality ==
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{{#set: transcription-direction=positive}}
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{{#set: common-name=l-glutamine}}
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{{#set: right-end-position=191335}}
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{{#set: inchi-key=inchikey=zdxpyrjpndtmrx-vkhmyheasa-n}}
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{{#set: left-end-position=172621}}
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{{#set: molecular-weight=146.146}}
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{{#set: centisome-position=52.38336    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:00, 18 March 2021

Gene SJ13884

  • transcription-direction:
    • positive
  • right-end-position:
    • 191335
  • left-end-position:
    • 172621
  • centisome-position:
    • 52.38336

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13884&oldid=131707"