Difference between revisions of "SJ13939"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P] == * common-name: ** 3...")
(Created page with "Category:gene == Gene SJ13939 == * transcription-direction: ** positive * right-end-position: ** 90896 * left-end-position: ** 83855 * centisome-position: ** 25.504276...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P] ==
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== Gene SJ13939 ==
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* common-name:
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* transcription-direction:
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** 3-deoxy-d-arabino-heptulosonate 7-phosphate
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** positive
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* smiles:
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* right-end-position:
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** c(=o)([o-])c(=o)cc(o)c(o)c(o)cop([o-])(=o)[o-]
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** 90896
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* inchi-key:
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* left-end-position:
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** pjwipexiffqaqz-pufimzngsa-k
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** 83855
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* molecular-weight:
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* centisome-position:
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** 285.124
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** 25.504276   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[DAHPSYN-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[DAHPSYN-RXN]]
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* [[ASNSYNA-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-deoxy-d-arabino-heptulosonate 7-phosphate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=pjwipexiffqaqz-pufimzngsa-k}}
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* [[ASNSYNB-RXN]]
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{{#set: molecular-weight=285.124}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLUTAMIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16820]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16821]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-2023]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5144]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[ASPARAGINESYN-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[ASPARAGINE-BIOSYNTHESIS]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[CITRULBIO-PWY]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[GLUTAMINDEG-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7889]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7892]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=90896}}
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{{#set: left-end-position=83855}}
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{{#set: centisome-position=25.504276    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:00, 18 March 2021

Gene SJ13939

  • transcription-direction:
    • positive
  • right-end-position:
    • 90896
  • left-end-position:
    • 83855
  • centisome-position:
    • 25.504276

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ASPARAGINESYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ASPARAGINE-BIOSYNTHESIS
    • 1 reactions found over 1 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13939&oldid=131624"