Difference between revisions of "SJ13957"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14394 CPD-14394] == * common-name: ** (8z,11z,14z,17z)-icosa-8,11,14,17-tetraenoyl-coa * sm...")
(Created page with "Category:gene == Gene SJ13957 == * transcription-direction: ** positive * right-end-position: ** 380459 * left-end-position: ** 373689 * centisome-position: ** 51.466995...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14394 CPD-14394] ==
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== Gene SJ13957 ==
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* common-name:
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* transcription-direction:
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** (8z,11z,14z,17z)-icosa-8,11,14,17-tetraenoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccc=ccc=ccc=ccc=cccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 380459
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* inchi-key:
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* left-end-position:
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** plhicykopitjjt-qwoxclfssa-j
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** 373689
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* molecular-weight:
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* centisome-position:
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** 1049.959
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** 51.466995   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16042]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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{{#set: common-name=(8z,11z,14z,17z)-icosa-8,11,14,17-tetraenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=plhicykopitjjt-qwoxclfssa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1049.959}}
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* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11277]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16030]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16121]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17730]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[TRIGLSYN-PWY]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7039]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6453]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7782]]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=380459}}
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{{#set: left-end-position=373689}}
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{{#set: centisome-position=51.466995    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ13957

  • transcription-direction:
    • positive
  • right-end-position:
    • 380459
  • left-end-position:
    • 373689
  • centisome-position:
    • 51.466995

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13957&oldid=131899"