Difference between revisions of "SJ13957"

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(Created page with "Category:gene == Gene SJ05673 == * transcription-direction: ** negative * right-end-position: ** 60946 * left-end-position: ** 54941 * centisome-position: ** 11.144467...")
(Created page with "Category:gene == Gene SJ13957 == * transcription-direction: ** positive * right-end-position: ** 380459 * left-end-position: ** 373689 * centisome-position: ** 51.466995...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05673 ==
+
== Gene SJ13957 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 60946
+
** 380459
 
* left-end-position:
 
* left-end-position:
−
** 54941
+
** 373689
 
* centisome-position:
 
* centisome-position:
−
** 11.144467    
+
** 51.466995    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12615]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7682]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-901]]
+
* [[RXN-11277]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[XANTHINE-OXIDASE-RXN]]
+
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TRIGLSYN-PWY]]
−
* [[PWY-6596]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7039]]
−
* [[P164-PWY]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''17''' reactions in the full pathway
+
* [[PWY-6453]]
−
* [[SALVADEHYPOX-PWY]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7782]]
−
* [[PWY-5497]]
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6606]]
+
{{#set: right-end-position=380459}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=373689}}
−
* [[PWY-6607]]
+
{{#set: centisome-position=51.466995   }}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[PWY-6999]]
+
{{#set: nb reaction associated=6}}
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
{{#set: nb pathway associated=4}}
−
* [[PWY-6608]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6538]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5695]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=60946}}
 
−
{{#set: left-end-position=54941}}
 
−
{{#set: centisome-position=11.144467   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=10}}
 

Latest revision as of 11:01, 18 March 2021

Gene SJ13957

  • transcription-direction:
    • positive
  • right-end-position:
    • 380459
  • left-end-position:
    • 373689
  • centisome-position:
    • 51.466995

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




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